Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798786.1_cds_XP_016461779.1_5475
CDS Infomation

[gene=LOC107785068] [db_xref=GeneID:107785068] [protein=transmembrane protein 209-like] [protein_id=XP_016461779.1] [location=join(20567..20763,22064..22119,22199..23124,24835..25030,25155..25340,25479..25855,26309..26452)] [gbkey=CDS]
Sequence

ATGAGTGCCGGCGGCGGCGGAGGAGTAAAAGAGCAGAGCTCGCCTCCACCTAAACCCTCA
AAATTCGCGGTGTACCAGAATCCAGCCTTCTCTGCTGCCCTAACAACCAACAGCCTTCGT
CCCTCCAAGTCTACTTTCCTTTTCATACTCTCTATTTCATTCGCTTCCGCTTCTGCTCTT
CTCAGCATATTTATTAGGGAAAGCGGGATTATTGACAGTCTGAAATTCAAATATGTTTCT
CAAGAAACTGCTTGTCTTTTTGCCAGACTGATACAGGCTTTTGCAGCCATAGTTTTAGTT
GGAACCTTTCTTGCCCTTTTCAAGGTTATTTATCTATGTACAACGAGGACTACTGATGTA
ACAATTATGCCACCTACCAAAGGAACAAAGGAGCATACACATCTGACTAATAGACAGTTA
GGGCTTTTGGGGATTAAACCAAAAGTTGAGCAAACTACTCTAGAGTCTTCAAAGAGACCT
CCCAAATCAAGAAGTATCTCAGCCTCTCTGTCTGATGTCCTTGTCCCTCTTCATCAGCCA
ATTGCTAGTTCAAACCATTCATCTAGACTTAGTGGTGACAAAGCAAGAACCGGTAGTGGA
ACTAAAGTACCATCTTTCAGCACCCCATCAAAATCACCGGCTTCCCCATCCTTGTATCTT
GTTCCAGCATCTTCTTCTCTATCATCTTCAATCCAGTCTTCACCAGGTGGGGAACACTTG
GTTGCCACCCCTTGGTCGAACAAGCGAGCTACTTTTCATAAAGAGATTGCAACAGAGGAA
CAGCTTGAAAAGTTCTTGGCTGATGTTGATGAGAGAATTACTGAATCAGGAAGCAAGCTG
GCAACTCCTCCACCCACCATAAGTGGGTNGCCCACCATAAGTGGGTTTGGCGTAGCCAGT
CCTGGTAACTTGCCCAGTTCCACTAATACTTCTGGAACTCCAAGAAGTACTCCTCTAAGG
CCTGTTAGGATGTCCCCTGGTTCCCAAAAGTTTACAACTCCACCAAAGAAAGGGGAAGGC
GATCTACCTCCTCCAATGTCAATGGAAGAGTCCACTGAAGCATTTGAGCATCTGGGGATC
TATCCACAGATCGAGCAGTGGCGTGATCGACTCAGGCAATGGTTTTCCTCCATGCTGCTA
AAGCCTTTGCTTTACAAAATTGATACTAGTCACACGAAGGTTATGCAAGCTGCAGCCAAA
CTAGGCATTACAATCACAATCAGTCAAGTCGGAAATGAAGCGCCTGATACTGGGACTGCT
GCTATATCTGCTACGGAGAGGACTAATGAATGGAAACCCTCATTTTCTGTTGAGGAAGAT
GGATTACTTCACCAGCTGCGTGTAACTCTTGTTCAAGCTCTTGATTCTTGCATGCCAAAG
ACAACTTCTGGAGTTCTTCAGCTATCCTCGCCACAGAACTCTCAGATCCCTATTTTACAA
GAGTGCATTGATGCCATCACTGAACACCAAAGGCTTCTCTCCTTAATGAAAGGAGAATGG
GCCAAGGGATTGCTGCCACAAAGCGGTGTCCGTGCAGAATATACAGTACATAGGATCCGA
GAGCTTGCAGAAGGAACCTGTACGAGGAACTATGATTATTTGGGCAGTGTAGAGGGGTAT
GGGAAAGGAACCAAGAAATGGAGTTCCGAGCTTCCAACAGATTCTCATTTGCTCCTATAT
TTATTTTGTGCTTTCCTGGAGCACCCAAAGTGGATGCTACATGTTGATCCTACAGCTTAT
GTTGGAGCCCAGTATAGCAAAAACCCCTTATTTTTGGGTGTATTACCTCCTAAAGAAAGG
TTCCCTGAAAAGTATGTAGCTGTTTTGTCAGGTGTACCCTCTGTGCTCCATCCAGGAGCT
TGCATATTGGCTGTGGGAAAACAAAGTCCCCCAGTTTTTGCCCTATCCTGGGATAAGAAG
CCTCAGTTCTCTCTCCGGGGAAGAACAGCACTTTGGGATTCTATCTTGCTGCTGTGCTAT
AAGATAAAGATTGGGTATGGAGGTTTTGTGCGGGGTATGCATCTTTCTTCGTCAGCATTG
GGCATTCTCCCAGTTCTTGATCCAGAAAAGGATGACTGCTGA

Peptide Sequence

PEP ID

XP_016461779.1
PEP Infomation

PREDICTED: transmembrane protein 209-like [Nicotiana tabacum]
Sequence

MSAGGGGGVKEQSSPPPKPSKFAVYQNPAFSAALTTNSLRPSKSTFLFILSISFASASAL
LSIFIRESGIIDSLKFKYVSQETACLFARLIQAFAAIVLVGTFLALFKVIYLCTTRTTDV
TIMPPTKGTKEHTHLTNRQLGLLGIKPKVEQTTLESSKRPPKSRSISASLSDVLVPLHQP
IASSNHSSRLSGDKARTGSGTKVPSFSTPSKSPASPSLYLVPASSSLSSSIQSSPGGEHL
VATPWSNKRATFHKEIATEEQLEKFLADVDERITESGSKLATPPPTISGXPTISGFGVAS
PGNLPSSTNTSGTPRSTPLRPVRMSPGSQKFTTPPKKGEGDLPPPMSMEESTEAFEHLGI
YPQIEQWRDRLRQWFSSMLLKPLLYKIDTSHTKVMQAAAKLGITITISQVGNEAPDTGTA
AISATERTNEWKPSFSVEEDGLLHQLRVTLVQALDSCMPKTTSGVLQLSSPQNSQIPILQ
ECIDAITEHQRLLSLMKGEWAKGLLPQSGVRAEYTVHRIRELAEGTCTRNYDYLGSVEGY
GKGTKKWSSELPTDSHLLLYLFCAFLEHPKWMLHVDPTAYVGAQYSKNPLFLGVLPPKER
FPEKYVAVLSGVPSVLHPGACILAVGKQSPPVFALSWDKKPQFSLRGRTALWDSILLLCY
KIKIGYGGFVRGMHLSSSALGILPVLDPEKDDC

Transcript Sequence

Gene sequence data has not been registered.